I want to crop the video at some position and move the part next to the part that wasn't cropped. (See image, it explains better)
This should do it:
ffmpeg -i input.mp4 \
-filter_complex "[0:v] crop=iw/3:ih:0:0,pad=iw:2*ih [left]; \
[0:v] crop=iw/3:ih:(iw/3)+1:0 [middle]; \
[0:v] crop=iw/3:ih:(2*iw/3)+1:0 [right]; \
[left][middle] overlay=0:main_h/2,pad=iw:(3*ih/2) [out1]; \
[out1][right] overlay=0:(2*main_h/3) [fout] " \
-c:v libx264 -an -map "[fout]" trisected-vertical-overlay.mp4
I haven't supplied any specific video or audio encoding parameters. This just shows the overlay filter to use. You'll have to encode and map the audio, as needed.
ffmpeg -i input -filter_complex \
"[0:v]crop=iw/3:ih:0:0[left]; \
[0:v]crop=iw/3[center]; \
[0:v]crop=iw/3:ih:ow*2:0[right]; \
[left][center][right]vstack=inputs=3[v]" \
-map "[v]" -map 0:a -c:a copy output
vstack is faster than pad + overlay.
If your
ffmpeg
is too old for the vstack filter then just download a recent build.